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Predictions

 
RNABindRPlus predicts RNA-binding residues from protein sequences by combining the output from a Support Vector Machine (SVM) classifier with the output from a Homology-based method. The old version of RNABindR (cited in Terribilini et al. 2007) is no longer maintained. A local version of RNABindRPlus is available, see the github repo here to get started: RNABindR-Local:. This local version requires database files (~50 GB uncompressed) available here Download .

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Job Title

1. Paste query AMINO ACID sequence(s) in FASTA format

Click here for an example

Optional.
Remove highly similar proteins with % sequence identity from homolog list
See Instructions for more details.

   

If you have a list of structure files for which you would like to calculate interface residues, please visit PRIDB.